CDS

Accession Number TCMCG015C07355
gbkey CDS
Protein Id XP_027104427.1
Location complement(join(5984273..5984396,5984987..5985166,5985242..5985314,5985880..5985920,5986006..5986170,5987284..5987361,5987463..5987620))
Gene LOC113725464
GeneID 113725464
Organism Coffea arabica

Protein

Length 272aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027248626.1
Definition serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description Serine arginine-rich SC35-like splicing factor SCL30
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12900        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAGGTATAGTCCACCATATTACAGTCCTTCAAGGAGAGGATATGGAGGTCGACCTAGAAGCCCTCTAAGAAGGGGCTATGGTGGAGAGCGTGGTAGGCGTAAAGAGCAAAATCATGGAAGTCTTTTGGTTCGAAACATTCCTTTGGATTGCAGGCCAGAAGAACTTCGAGTTCCCTTTGAAAGATTTGGATTAGTCAGGGATGTCTACCTTCCAAAGGACTATTACACAGGGGAACCTCGTGGCTTTGCTTTTGTGCAGTTCGTTGATCCCTATGAAGCTGCAGAGGCTCAATATCAAATGAATGGACAGATTTTTGCTGGTAGGGAGATATCTGTAGTTGTTGCTGCTGAGACTAGAAAAAGGCCTGAAGAGATGCGCAGAAAAGCTAGGACTGGTGGACCTGTAGGCTATGGGGTACGACGGTCATCTTACTATGGGCATTCTAGGTCTCGCTCTCGTTCACGCTCCCCTCGATATGCTTCAGGTTCTAGAGGTCGATATAGATCAAGGTCGTACTCTCCTGCACCAAGGGGCCGTAATGATTATTCTATTTCTCCACCGAGAAGGTATGATGATCGCCCTAGATCTCCAAGAGATCATCTGCAAGACCGAGACCTTGTTCATATTCACAGGTCATATTCTCCTGGTTACCATGATGTGGCTGACCGAAATGGCAGCAGCTATGCCAAGAAAACTGAGCTTGAATCTGGGGAAGCAGTGGCTCACTGGAGACCATCCCCTGGTCAGGCATCAAGGTCACCCTCTGGATCCAGATCCAGGTCAGCTGATATTTCTCCCAGGCATGGCAGATAA
Protein:  
MRRYSPPYYSPSRRGYGGRPRSPLRRGYGGERGRRKEQNHGSLLVRNIPLDCRPEELRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQYQMNGQIFAGREISVVVAAETRKRPEEMRRKARTGGPVGYGVRRSSYYGHSRSRSRSRSPRYASGSRGRYRSRSYSPAPRGRNDYSISPPRRYDDRPRSPRDHLQDRDLVHIHRSYSPGYHDVADRNGSSYAKKTELESGEAVAHWRPSPGQASRSPSGSRSRSADISPRHGR